Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
OPN1SWP03999 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.17■□□□□ 0.18
OPN1SWP03999 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.17■□□□□ 0.18
OPN1SWP03999 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.17■□□□□ 0.18
OPN1SWP03999 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.17■□□□□ 0.18
OPN1SWP03999 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.17■□□□□ 0.18
OPN1SWP03999 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.17■□□□□ 0.18
OPN1SWP03999 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
OPN1SWP03999 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPN1SWP03999 AC078925.2-201ENST00000624013 1973 ntBASIC16.17■□□□□ 0.18
OPN1SWP03999 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
OPN1SWP03999 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.16■□□□□ 0.18
OPN1SWP03999 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 MYCLP1-201ENST00000372451 1075 ntBASIC16.16■□□□□ 0.18
OPN1SWP03999 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
OPN1SWP03999 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.16■□□□□ 0.18
OPN1SWP03999 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.16■□□□□ 0.18
OPN1SWP03999 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.16■□□□□ 0.18
OPN1SWP03999 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.16■□□□□ 0.18
OPN1SWP03999 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.16■□□□□ 0.18
OPN1SWP03999 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.16■□□□□ 0.18
OPN1SWP03999 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
OPN1SWP03999 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
OPN1SWP03999 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.16■□□□□ 0.18
OPN1SWP03999 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
OPN1SWP03999 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
OPN1SWP03999 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.16■□□□□ 0.18
OPN1SWP03999 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.16■□□□□ 0.18
OPN1SWP03999 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.16■□□□□ 0.18
OPN1SWP03999 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
OPN1SWP03999 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OPN1SWP03999 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
OPN1SWP03999 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.15■□□□□ 0.18
OPN1SWP03999 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.15■□□□□ 0.18
OPN1SWP03999 AL645929.1-201ENST00000420084 975 ntBASIC16.15■□□□□ 0.18
OPN1SWP03999 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
OPN1SWP03999 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.15■□□□□ 0.18
OPN1SWP03999 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.15■□□□□ 0.18
OPN1SWP03999 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.15■□□□□ 0.18
OPN1SWP03999 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
OPN1SWP03999 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 FER1L4-210ENST00000615531 5998 ntBASIC16.15■□□□□ 0.18
OPN1SWP03999 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms