Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL2A1P02458 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL2A1P02458 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 LINC00895-201ENST00000629028 1637 ntBASIC19.95■□□□□ 0.78
COL2A1P02458 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.95■□□□□ 0.78
COL2A1P02458 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL2A1P02458 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.95■□□□□ 0.78
COL2A1P02458 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.95■□□□□ 0.78
COL2A1P02458 AC069262.1-201ENST00000539058 672 ntBASIC19.95■□□□□ 0.78
COL2A1P02458 AC124947.2-201ENST00000547118 1133 ntBASIC19.95■□□□□ 0.78
COL2A1P02458 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.95■□□□□ 0.78
COL2A1P02458 MPDU1-223ENST00000582151 728 ntBASIC19.95■□□□□ 0.78
COL2A1P02458 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.95■□□□□ 0.78
COL2A1P02458 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.95■□□□□ 0.78
COL2A1P02458 AL390955.2-201ENST00000603032 514 ntBASIC19.95■□□□□ 0.78
COL2A1P02458 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.95■□□□□ 0.78
COL2A1P02458 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.95■□□□□ 0.78
COL2A1P02458 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL2A1P02458 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.95■□□□□ 0.78
COL2A1P02458 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL2A1P02458 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL2A1P02458 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.95■□□□□ 0.78
COL2A1P02458 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL2A1P02458 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.94■□□□□ 0.78
COL2A1P02458 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
COL2A1P02458 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
COL2A1P02458 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COL2A1P02458 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL2A1P02458 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.94■□□□□ 0.78
COL2A1P02458 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 AC092364.2-202ENST00000597012 1073 ntBASIC19.94■□□□□ 0.78
COL2A1P02458 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.94■□□□□ 0.78
COL2A1P02458 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.94■□□□□ 0.78
COL2A1P02458 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL2A1P02458 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL2A1P02458 AL021920.2-201ENST00000624828 1351 ntBASIC19.93■□□□□ 0.78
COL2A1P02458 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL2A1P02458 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.93■□□□□ 0.78
COL2A1P02458 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.93■□□□□ 0.78
COL2A1P02458 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.93■□□□□ 0.78
COL2A1P02458 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
COL2A1P02458 AC008267.7-201ENST00000624570 1194 ntBASIC19.93■□□□□ 0.78
COL2A1P02458 AP001350.2-201ENST00000625104 1094 ntBASIC19.93■□□□□ 0.78
COL2A1P02458 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.93■□□□□ 0.78
COL2A1P02458 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.93■□□□□ 0.78
COL2A1P02458 GNAS-203ENST00000306120 1878 ntBASIC19.93■□□□□ 0.78
COL2A1P02458 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL2A1P02458 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL2A1P02458 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.93■□□□□ 0.78
COL2A1P02458 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
COL2A1P02458 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL2A1P02458 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.93■□□□□ 0.78
COL2A1P02458 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.93■□□□□ 0.78
COL2A1P02458 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL2A1P02458 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL2A1P02458 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.93■□□□□ 0.78
COL2A1P02458 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL2A1P02458 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL2A1P02458 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL2A1P02458 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.93■□□□□ 0.78
COL2A1P02458 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL2A1P02458 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms