Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFBP01127 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDGFBP01127 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.19■□□□□ 0.34
PDGFBP01127 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFBP01127 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDGFBP01127 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.19■□□□□ 0.34
PDGFBP01127 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PDGFBP01127 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.19■□□□□ 0.34
PDGFBP01127 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 AC092552.1-201ENST00000547243 906 ntBASIC17.19■□□□□ 0.34
PDGFBP01127 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFBP01127 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDGFBP01127 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFBP01127 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFBP01127 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDGFBP01127 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.19■□□□□ 0.34
PDGFBP01127 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFBP01127 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.18■□□□□ 0.34
PDGFBP01127 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.18■□□□□ 0.34
PDGFBP01127 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.18■□□□□ 0.34
PDGFBP01127 AC022210.1-201ENST00000449856 793 ntBASIC17.18■□□□□ 0.34
PDGFBP01127 RAB43P1-201ENST00000561790 589 ntBASIC17.18■□□□□ 0.34
PDGFBP01127 AC104794.3-201ENST00000566840 1248 ntBASIC17.18■□□□□ 0.34
PDGFBP01127 MIR4259-201ENST00000584466 101 ntBASIC17.18■□□□□ 0.34
PDGFBP01127 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.18■□□□□ 0.34
PDGFBP01127 AL033527.4-201ENST00000641026 673 ntBASIC17.18■□□□□ 0.34
PDGFBP01127 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.18■□□□□ 0.34
PDGFBP01127 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PDGFBP01127 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.18■□□□□ 0.34
PDGFBP01127 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFBP01127 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDGFBP01127 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PDGFBP01127 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFBP01127 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFBP01127 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.17■□□□□ 0.34
PDGFBP01127 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PDGFBP01127 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PDGFBP01127 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PDGFBP01127 AP006294.1-201ENST00000415407 339 ntBASIC17.17■□□□□ 0.34
PDGFBP01127 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.17■□□□□ 0.34
PDGFBP01127 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.17■□□□□ 0.34
PDGFBP01127 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.17■□□□□ 0.34
PDGFBP01127 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.17■□□□□ 0.34
PDGFBP01127 WASH4P-201ENST00000564273 1246 ntBASIC17.17■□□□□ 0.34
PDGFBP01127 RARRES2P9-201ENST00000565168 469 ntBASIC17.17■□□□□ 0.34
PDGFBP01127 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PDGFBP01127 AC005412.3-201ENST00000580309 715 ntBASIC17.17■□□□□ 0.34
PDGFBP01127 AC004840.1-201ENST00000636359 365 ntBASIC17.17■□□□□ 0.34
PDGFBP01127 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFBP01127 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFBP01127 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.17■□□□□ 0.34
PDGFBP01127 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PDGFBP01127 AC138932.1-201ENST00000534164 6830 ntBASIC17.17■□□□□ 0.34
PDGFBP01127 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFBP01127 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.17■□□□□ 0.34
PDGFBP01127 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PDGFBP01127 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PDGFBP01127 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.16■□□□□ 0.34
PDGFBP01127 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFBP01127 REXO1L6P-201ENST00000603433 1515 ntBASIC17.16■□□□□ 0.34
PDGFBP01127 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.16■□□□□ 0.34
PDGFBP01127 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFBP01127 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFBP01127 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFBP01127 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDGFBP01127 AC116562.4-201ENST00000641316 2276 ntBASIC17.16■□□□□ 0.34
PDGFBP01127 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFBP01127 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFBP01127 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFBP01127 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms