Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN3O95197 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTN3O95197 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 GPR89P-201ENST00000407924 1495 ntBASIC18.22■□□□□ 0.51
RTN3O95197 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RTN3O95197 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
RTN3O95197 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN3O95197 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RTN3O95197 AL671883.3-201ENST00000603274 991 ntBASIC18.22■□□□□ 0.51
RTN3O95197 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN3O95197 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RTN3O95197 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RTN3O95197 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN3O95197 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 AL355312.1-201ENST00000407115 2176 ntBASIC18.21■□□□□ 0.51
RTN3O95197 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RTN3O95197 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN3O95197 AC034105.1-201ENST00000563488 319 ntBASIC18.21■□□□□ 0.51
RTN3O95197 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN3O95197 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RTN3O95197 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN3O95197 AL135999.2-201ENST00000622438 1686 ntBASIC18.21■□□□□ 0.51
RTN3O95197 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN3O95197 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN3O95197 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTN3O95197 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTN3O95197 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.21■□□□□ 0.5
RTN3O95197 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN3O95197 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTN3O95197 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN3O95197 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN3O95197 AC009947.1-201ENST00000444350 727 ntBASIC18.2■□□□□ 0.5
RTN3O95197 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.2■□□□□ 0.5
RTN3O95197 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.2■□□□□ 0.5
RTN3O95197 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN3O95197 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN3O95197 AC027601.4-201ENST00000611259 610 ntBASIC18.2■□□□□ 0.5
RTN3O95197 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.2■□□□□ 0.5
RTN3O95197 AL805961.1-202ENST00000641562 540 ntBASIC18.2■□□□□ 0.5
RTN3O95197 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
RTN3O95197 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTN3O95197 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN3O95197 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RTN3O95197 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms