Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.82■□□□□ 0.28
CNOT3O75175 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 AC008608.2-201ENST00000606089 416 ntBASIC16.82■□□□□ 0.28
CNOT3O75175 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.82■□□□□ 0.28
CNOT3O75175 AC148477.8-201ENST00000624298 468 ntBASIC16.82■□□□□ 0.28
CNOT3O75175 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 AC068418.2-201ENST00000577309 3703 ntBASIC16.82■□□□□ 0.28
CNOT3O75175 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CNOT3O75175 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 AC093677.2-201ENST00000600169 1863 ntBASIC16.82■□□□□ 0.28
CNOT3O75175 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT3O75175 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT3O75175 FAM197Y8-203ENST00000450145 560 ntBASIC16.81■□□□□ 0.28
CNOT3O75175 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 FGFR3P6-201ENST00000457012 610 ntBASIC16.81■□□□□ 0.28
CNOT3O75175 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT3O75175 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 AL662844.1-201ENST00000546340 181 ntBASIC16.81■□□□□ 0.28
CNOT3O75175 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.81■□□□□ 0.28
CNOT3O75175 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.81■□□□□ 0.28
CNOT3O75175 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT3O75175 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CNOT3O75175 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CNOT3O75175 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CNOT3O75175 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT3O75175 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 KRT8P47-201ENST00000604727 1398 ntBASIC16.8■□□□□ 0.28
CNOT3O75175 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNOT3O75175 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT3O75175 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.8■□□□□ 0.28
CNOT3O75175 AC079776.4-201ENST00000511039 504 ntBASIC16.8■□□□□ 0.28
CNOT3O75175 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNOT3O75175 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms