Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 ABHD17AP1-201ENST00000358206 933 ntBASIC12.98□□□□□ -0.33
SNAI2O43623 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.98□□□□□ -0.33
SNAI2O43623 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 AC113404.2-201ENST00000507884 177 ntBASIC12.98□□□□□ -0.33
SNAI2O43623 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.98□□□□□ -0.33
SNAI2O43623 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 AC092666.2-201ENST00000613287 246 ntBASIC12.98□□□□□ -0.33
SNAI2O43623 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.98□□□□□ -0.33
SNAI2O43623 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SNAI2O43623 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNAI2O43623 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.97□□□□□ -0.33
SNAI2O43623 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 AGGF1P2-201ENST00000426656 2106 ntBASIC12.97□□□□□ -0.33
SNAI2O43623 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SNAI2O43623 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SNAI2O43623 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.97□□□□□ -0.33
SNAI2O43623 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.97□□□□□ -0.33
SNAI2O43623 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.97□□□□□ -0.33
SNAI2O43623 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
SNAI2O43623 AC113410.3-201ENST00000623366 203 ntBASIC12.97□□□□□ -0.33
SNAI2O43623 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms