Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD2O14647 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD2O14647 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD2O14647 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD2O14647 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD2O14647 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD2O14647 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CHD2O14647 AC112492.5-201ENST00000421897 457 ntBASIC23.65■■□□□ 1.38
CHD2O14647 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD2O14647 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.65■■□□□ 1.38
CHD2O14647 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CHD2O14647 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD2O14647 AC131009.4-201ENST00000624048 1740 ntBASIC23.65■■□□□ 1.38
CHD2O14647 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.64■■□□□ 1.38
CHD2O14647 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
CHD2O14647 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHD2O14647 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHD2O14647 RN7SL837P-201ENST00000463010 287 ntBASIC23.64■■□□□ 1.38
CHD2O14647 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
CHD2O14647 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHD2O14647 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.64■■□□□ 1.38
CHD2O14647 WT1-AS_2.1-201ENST00000613208 137 ntBASIC23.64■■□□□ 1.38
CHD2O14647 MIR6805-201ENST00000615055 62 ntBASIC23.64■■□□□ 1.38
CHD2O14647 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC23.64■■□□□ 1.37
CHD2O14647 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHD2O14647 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHD2O14647 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC23.64■■□□□ 1.37
CHD2O14647 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC23.64■■□□□ 1.37
CHD2O14647 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD2O14647 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD2O14647 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD2O14647 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CHD2O14647 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC23.63■■□□□ 1.37
CHD2O14647 CETN4P-206ENST00000642099 2168 ntBASIC23.63■■□□□ 1.37
CHD2O14647 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.63■■□□□ 1.37
CHD2O14647 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD2O14647 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.63■■□□□ 1.37
CHD2O14647 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC23.63■■□□□ 1.37
CHD2O14647 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 AL512384.1-201ENST00000406683 331 ntBASIC23.63■■□□□ 1.37
CHD2O14647 AL353779.1-201ENST00000434793 351 ntBASIC23.63■■□□□ 1.37
CHD2O14647 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD2O14647 AC106886.1-201ENST00000568660 600 ntBASIC23.63■■□□□ 1.37
CHD2O14647 APOC4-201ENST00000591600 348 ntTSL 3 BASIC23.63■■□□□ 1.37
CHD2O14647 AL133215.2-201ENST00000609242 977 ntBASIC23.63■■□□□ 1.37
CHD2O14647 AL033527.4-201ENST00000641026 673 ntBASIC23.63■■□□□ 1.37
CHD2O14647 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD2O14647 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CHD2O14647 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CHD2O14647 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC23.62■■□□□ 1.37
CHD2O14647 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD2O14647 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CHD2O14647 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC23.62■■□□□ 1.37
CHD2O14647 PRYP6-201ENST00000514804 343 ntBASIC23.62■■□□□ 1.37
CHD2O14647 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CHD2O14647 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC23.62■■□□□ 1.37
CHD2O14647 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CHD2O14647 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD2O14647 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD2O14647 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD2O14647 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 AC098614.1-201ENST00000368528 745 ntBASIC23.61■■□□□ 1.37
CHD2O14647 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CHD2O14647 HLA-H-201ENST00000383620 1096 ntBASIC23.61■■□□□ 1.37
CHD2O14647 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 Six3os1_5.1-201ENST00000611000 271 ntBASIC23.61■■□□□ 1.37
CHD2O14647 AL162274.1-201ENST00000617191 1098 ntBASIC23.61■■□□□ 1.37
CHD2O14647 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC23.61■■□□□ 1.37
CHD2O14647 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
CHD2O14647 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD2O14647 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms