Protein–RNA interactions for Protein: A6NFT4

CFAP73, Cilia- and flagella-associated protein 73, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP73A6NFT4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CFAP73A6NFT4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP73A6NFT4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CFAP73A6NFT4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 DBET-201ENST00000630918 3363 ntBASIC17.11■□□□□ 0.33
CFAP73A6NFT4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 AC008622.2-201ENST00000617006 1229 ntBASIC17.11■□□□□ 0.33
CFAP73A6NFT4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP73A6NFT4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 RBM17P1-201ENST00000453646 1190 ntBASIC17.1■□□□□ 0.33
CFAP73A6NFT4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 AC132938.6-201ENST00000623828 1655 ntBASIC17.1■□□□□ 0.33
CFAP73A6NFT4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CFAP73A6NFT4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 AL023284.2-201ENST00000405850 579 ntBASIC17.09■□□□□ 0.33
CFAP73A6NFT4 MCCD1P1-208ENST00000445732 328 ntBASIC17.09■□□□□ 0.33
CFAP73A6NFT4 SNORA78-201ENST00000459373 127 ntBASIC17.09■□□□□ 0.33
CFAP73A6NFT4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP73A6NFT4 KRT17P2-201ENST00000300992 1314 ntBASIC17.09■□□□□ 0.33
CFAP73A6NFT4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms