Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AL022342.1-201ENST00000400363 863 ntBASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC018712.1-201ENST00000455767 687 ntBASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NKAPP1-205ENST00000585790 367 ntBASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC116353.5-201ENST00000638148 1699 ntBASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AL031284.1-201ENST00000419297 478 ntBASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 SCARNA2-201ENST00000458748 420 ntBASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 RNPS1P1-201ENST00000507437 918 ntBASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 BX005266.1-201ENST00000473402 457 ntBASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC073648.2-201ENST00000510116 352 ntBASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
TNFSF12-TNFSF13A0A0A6YY99 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms