Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC233702.3-201ENST00000578656 1387 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC103564.2-201ENST00000432853 1299 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC091607.1-201ENST00000490318 1060 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC122714.2-201ENST00000502787 707 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC096582.2-201ENST00000510860 516 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AP000867.3-201ENST00000524675 377 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AC093458.2-201ENST00000623150 629 ntBASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRGV1A0A0A0MS02 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AC016396.2-201ENST00000562575 1417 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 DRAXINP1-201ENST00000437611 948 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 KRT17P6-201ENST00000453795 1220 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AC104819.1-201ENST00000504587 486 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 TPSP2-201ENST00000561760 610 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AC074051.2-201ENST00000565115 352 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV1A0A0A0MS02 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms