Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DRB4X5D2U9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DRB4X5D2U9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HLA-DRB4X5D2U9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 KRT17P6-201ENST00000453795 1220 ntBASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 MINOS1P3-201ENST00000457048 203 ntBASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 AC091607.1-201ENST00000490318 1060 ntBASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 AP005901.3-202ENST00000581653 237 ntBASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DRB4X5D2U9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MYCLP1-201ENST00000372451 1075 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AC103564.2-201ENST00000432853 1299 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AC104819.1-201ENST00000504587 486 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MIR3180-1-201ENST00000580374 94 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MIR3180-3-201ENST00000584616 94 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AC092329.2-201ENST00000598402 547 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AC093458.2-201ENST00000623150 629 ntBASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms