Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 AL163051.1-201ENST00000569214 1512 ntBASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AC012618.2-201ENST00000428058 849 ntBASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AC006058.4-201ENST00000624016 1670 ntBASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 AC034236.2-201ENST00000606662 1610 ntBASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 NBPF21P-201ENST00000425093 1451 ntBASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH1Q9Y2L9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 AC004264.1-201ENST00000608354 794 ntBASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 AP001412.1-201ENST00000608405 714 ntBASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms