Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 GUSBP12-201ENST00000513727 720 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RNF6Q9Y252 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF6Q9Y252 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF6Q9Y252 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF6Q9Y252 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF6Q9Y252 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF6Q9Y252 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF6Q9Y252 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 AL592071.1-201ENST00000611956 408 ntBASIC16.33■□□□□ 0.2
RNF6Q9Y252 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 AC124864.1-201ENST00000623408 392 ntBASIC16.33■□□□□ 0.2
RNF6Q9Y252 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 AL162727.3-201ENST00000635661 2787 ntBASIC16.33■□□□□ 0.2
RNF6Q9Y252 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 AC132938.6-201ENST00000623828 1655 ntBASIC16.33■□□□□ 0.2
RNF6Q9Y252 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF6Q9Y252 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF6Q9Y252 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF6Q9Y252 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF6Q9Y252 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 PCDHA14-201ENST00000506751 2298 ntBASIC16.31■□□□□ 0.2
RNF6Q9Y252 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms