Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 WRB-204ENST00000398753 699 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 HLA-V-201ENST00000429037 534 ntBASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 DUT-210ENST00000559935 569 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 CD81-202ENST00000381036 880 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 BAD-202ENST00000394531 631 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 PMS2P4-201ENST00000412466 1052 ntBASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 AC005237.2-201ENST00000434368 219 ntBASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SHANK2Q9UPX8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHANK2Q9UPX8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC25.39■■□□□ 1.66
SHANK2Q9UPX8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHANK2Q9UPX8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHANK2Q9UPX8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC25.39■■□□□ 1.65
SHANK2Q9UPX8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 GAPDHP21-201ENST00000450301 1010 ntBASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SHANK2Q9UPX8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 MEIS3P1-201ENST00000495167 958 ntBASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 KRT8P49-201ENST00000604166 1432 ntBASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 AC016027.1-202ENST00000607927 1699 ntBASIC25.37■■□□□ 1.65
SHANK2Q9UPX8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 KLF2P3-201ENST00000451977 1087 ntBASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 AP000842.3-202ENST00000569238 1080 ntBASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 MIR4492-201ENST00000581627 80 ntBASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms