Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMG5Q9UPR3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMG5Q9UPR3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SMG5Q9UPR3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMG5Q9UPR3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMG5Q9UPR3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.21■□□□□ 0.5
SMG5Q9UPR3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 AC009102.3-201ENST00000623118 1491 ntBASIC18.2■□□□□ 0.5
SMG5Q9UPR3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.2■□□□□ 0.5
SMG5Q9UPR3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 AC002347.1-201ENST00000569543 541 ntBASIC18.2■□□□□ 0.5
SMG5Q9UPR3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG5Q9UPR3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.19■□□□□ 0.5
SMG5Q9UPR3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 MIR149-201ENST00000384879 89 ntBASIC18.19■□□□□ 0.5
SMG5Q9UPR3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 AC004832.2-201ENST00000426397 482 ntBASIC18.19■□□□□ 0.5
SMG5Q9UPR3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 METTL21AP1-201ENST00000438852 635 ntBASIC18.19■□□□□ 0.5
SMG5Q9UPR3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 KRT18P28-201ENST00000453838 1332 ntBASIC18.19■□□□□ 0.5
SMG5Q9UPR3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG5Q9UPR3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 AL163051.1-201ENST00000569214 1512 ntBASIC18.18■□□□□ 0.5
SMG5Q9UPR3 AL355312.1-201ENST00000407115 2176 ntBASIC18.18■□□□□ 0.5
SMG5Q9UPR3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.18■□□□□ 0.5
SMG5Q9UPR3 AC011676.5-201ENST00000624864 2660 ntBASIC18.18■□□□□ 0.5
SMG5Q9UPR3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 OR7E14P-202ENST00000530490 1290 ntBASIC18.18■□□□□ 0.5
SMG5Q9UPR3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMG5Q9UPR3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms