Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 SLC25A6P5-201ENST00000435663 894 ntBASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 BCRP1-201ENST00000444246 691 ntBASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 AL096865.1-201ENST00000606796 927 ntBASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2IRD1Q9UHL9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SPDYE11-202ENST00000450699 704 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SPDYE9P-201ENST00000570642 692 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 MIR4515-201ENST00000584082 81 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 AC015911.4-201ENST00000588022 1070 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SPDYE10P-202ENST00000612005 668 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SPDYE8P-202ENST00000612377 668 ntBASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2IRD1Q9UHL9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GTF2IRD1Q9UHL9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.89■□□□□ 0.62
GTF2IRD1Q9UHL9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.89■□□□□ 0.62
GTF2IRD1Q9UHL9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
GTF2IRD1Q9UHL9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GTF2IRD1Q9UHL9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 FAM86GP-201ENST00000448322 971 ntBASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2IRD1Q9UHL9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF2IRD1Q9UHL9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms