Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 AP000867.4-201ENST00000641616 219 ntBASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA9Q9UGM1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 AC009336.1-201ENST00000608941 1553 ntBASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 TSPY19P-201ENST00000418461 509 ntBASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 TSPY18P-201ENST00000441642 509 ntBASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 AC091304.2-201ENST00000564639 760 ntBASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 CLEC4GP1-201ENST00000596555 870 ntBASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA9Q9UGM1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 AC132008.2-207ENST00000454517 770 ntBASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 LINC01711-201ENST00000598340 967 ntBASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA9Q9UGM1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA9Q9UGM1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms