Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 AL024508.2-201ENST00000607749 1894 ntBASIC15.27■□□□□ 0.04
DUX4Q9UBX2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.04
DUX4Q9UBX2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 HBZP1-201ENST00000354915 429 ntBASIC15.27■□□□□ 0.04
DUX4Q9UBX2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 AL031133.1-201ENST00000406807 723 ntBASIC15.27■□□□□ 0.04
DUX4Q9UBX2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 AC087388.1-201ENST00000571370 1112 ntBASIC15.27■□□□□ 0.04
DUX4Q9UBX2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.27■□□□□ 0.04
DUX4Q9UBX2 AL590326.2-201ENST00000625139 305 ntBASIC15.27■□□□□ 0.04
DUX4Q9UBX2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX4Q9UBX2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 PVRIG2P-201ENST00000435460 978 ntBASIC15.26■□□□□ 0.03
DUX4Q9UBX2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.26■□□□□ 0.03
DUX4Q9UBX2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.26■□□□□ 0.03
DUX4Q9UBX2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX4Q9UBX2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms