Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 ELK2BP-201ENST00000415014 1224 ntBASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 AP001160.2-201ENST00000596071 487 ntBASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 AC141586.5-201ENST00000624546 2050 ntBASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC6Q9UBN7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 AC134684.3-201ENST00000641758 218 ntBASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 AC084018.2-201ENST00000613093 2607 ntBASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC6Q9UBN7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 AC100803.2-201ENST00000562459 1963 ntBASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC6Q9UBN7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms