Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNNBIP1Q9NSA3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTNNBIP1Q9NSA3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CTNNBIP1Q9NSA3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 DOC2GP-204ENST00000639052 2548 ntBASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 HLA-F-220ENST00000434407 884 ntBASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 AC068472.1-201ENST00000474589 881 ntBASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 AC092053.1-201ENST00000605787 1936 ntBASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 AL353692.3-201ENST00000407031 1396 ntBASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNNBIP1Q9NSA3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 IGHGP-201ENST00000390555 1178 ntBASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 AP003733.1-201ENST00000491725 852 ntBASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 AC124947.2-201ENST00000547118 1133 ntBASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 ZNF444P1-201ENST00000559497 298 ntBASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTNNBIP1Q9NSA3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms