Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 AC004980.1-204ENST00000429707 299 ntBASIC20.49■□□□□ 0.87
RTN4Q9NQC3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC20.49■□□□□ 0.87
RTN4Q9NQC3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 KRT8P45-201ENST00000414328 1447 ntBASIC20.49■□□□□ 0.87
RTN4Q9NQC3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 AC112777.1-201ENST00000540175 1423 ntBASIC20.49■□□□□ 0.87
RTN4Q9NQC3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 AC092068.3-201ENST00000587894 2016 ntBASIC20.49■□□□□ 0.87
RTN4Q9NQC3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4Q9NQC3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 AL355802.2-201ENST00000402069 882 ntBASIC20.48■□□□□ 0.87
RTN4Q9NQC3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTN4Q9NQC3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 MTATP6P19-201ENST00000413797 659 ntBASIC20.47■□□□□ 0.87
RTN4Q9NQC3 AC239809.2-201ENST00000415381 517 ntBASIC20.47■□□□□ 0.87
RTN4Q9NQC3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTN4Q9NQC3 AC131212.4-201ENST00000623606 975 ntBASIC20.47■□□□□ 0.87
RTN4Q9NQC3 MYC-208ENST00000641036 567 ntBASIC20.47■□□□□ 0.87
RTN4Q9NQC3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms