Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 YBX1P2-201ENST00000489612 999 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 USF2-205ENST00000594064 1179 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AC009154.2-201ENST00000621177 724 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AC005052.1-201ENST00000625181 2492 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 AL391807.1-203ENST00000604392 2365 ntBASIC10.36□□□□□ -0.75
LIMD2Q9BT23 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LIMD2Q9BT23 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 AK4P3-201ENST00000418260 669 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 DDX43P3-201ENST00000441064 443 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 AP003733.1-201ENST00000491725 852 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 AC010203.1-204ENST00000548782 407 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 FGF14-AS2-201ENST00000606448 1074 ntBASIC10.35□□□□□ -0.75
LIMD2Q9BT23 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LIMD2Q9BT23 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms