Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.84■□□□□ 0.45
CDX2Q99626 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 AC105233.2-201ENST00000523697 349 ntBASIC17.84■□□□□ 0.45
CDX2Q99626 AF228730.5-201ENST00000530288 346 ntBASIC17.84■□□□□ 0.45
CDX2Q99626 ZNF890P-202ENST00000530367 1156 ntBASIC17.84■□□□□ 0.45
CDX2Q99626 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.84■□□□□ 0.45
CDX2Q99626 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.84■□□□□ 0.45
CDX2Q99626 U1.21-201ENST00000580816 167 ntBASIC17.84■□□□□ 0.45
CDX2Q99626 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.84■□□□□ 0.45
CDX2Q99626 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
CDX2Q99626 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.84■□□□□ 0.45
CDX2Q99626 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX2Q99626 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX2Q99626 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDX2Q99626 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDX2Q99626 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX2Q99626 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDX2Q99626 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.83■□□□□ 0.45
CDX2Q99626 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.83■□□□□ 0.44
CDX2Q99626 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX2Q99626 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDX2Q99626 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.83■□□□□ 0.44
CDX2Q99626 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 AL353705.2-201ENST00000428243 662 ntBASIC17.83■□□□□ 0.44
CDX2Q99626 ELK1P1-201ENST00000485699 580 ntBASIC17.83■□□□□ 0.44
CDX2Q99626 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.83■□□□□ 0.44
CDX2Q99626 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.83■□□□□ 0.44
CDX2Q99626 AC055876.2-201ENST00000531834 546 ntBASIC17.83■□□□□ 0.44
CDX2Q99626 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CDX2Q99626 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.83■□□□□ 0.44
CDX2Q99626 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.83■□□□□ 0.44
CDX2Q99626 RN7SL828P-201ENST00000607615 303 ntBASIC17.83■□□□□ 0.44
CDX2Q99626 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CDX2Q99626 AC046185.3-201ENST00000623228 1824 ntBASIC17.83■□□□□ 0.44
CDX2Q99626 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX2Q99626 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX2Q99626 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX2Q99626 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX2Q99626 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDX2Q99626 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX2Q99626 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX2Q99626 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX2Q99626 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX2Q99626 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CDX2Q99626 AL355994.2-201ENST00000447882 704 ntBASIC17.82■□□□□ 0.44
CDX2Q99626 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX2Q99626 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.82■□□□□ 0.44
CDX2Q99626 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.82■□□□□ 0.44
CDX2Q99626 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.82■□□□□ 0.44
CDX2Q99626 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDX2Q99626 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.82■□□□□ 0.44
CDX2Q99626 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDX2Q99626 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.82■□□□□ 0.44
CDX2Q99626 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX2Q99626 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.82■□□□□ 0.44
CDX2Q99626 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX2Q99626 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX2Q99626 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX2Q99626 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CDX2Q99626 TUBB1P2-201ENST00000422712 1306 ntBASIC17.81■□□□□ 0.44
CDX2Q99626 TUBB1P1-201ENST00000503144 1300 ntBASIC17.81■□□□□ 0.44
CDX2Q99626 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX2Q99626 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX2Q99626 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX2Q99626 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDX2Q99626 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDX2Q99626 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX2Q99626 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX2Q99626 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.81■□□□□ 0.44
CDX2Q99626 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX2Q99626 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.81■□□□□ 0.44
CDX2Q99626 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX2Q99626 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX2Q99626 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX2Q99626 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX2Q99626 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms