Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNGAP1Q96PV0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 AC068137.2-201ENST00000605408 478 ntBASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 AL513210.1-201ENST00000629608 234 ntBASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 AC092902.6-201ENST00000641783 218 ntBASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNGAP1Q96PV0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 FAM185BP-201ENST00000443595 716 ntBASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNGAP1Q96PV0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNGAP1Q96PV0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms