Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 MRPL20P1-201ENST00000400819 433 ntBASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 PRSS29P-201ENST00000440800 595 ntBASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 AC140113.2-201ENST00000604370 208 ntBASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 FAM197Y3-203ENST00000618346 717 ntBASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 AC004790.2-201ENST00000623588 572 ntBASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCD1Q96GM5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCD1Q96GM5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCD1Q96GM5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 SLC25A1P3-201ENST00000395415 828 ntBASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 AC010654.1-201ENST00000615722 808 ntBASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.14■□□□□ 0.49
SMARCD1Q96GM5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 CRYGEP-201ENST00000412192 528 ntBASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 PAWRP1-201ENST00000451083 565 ntBASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SMARCD1Q96GM5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 MIR940-201ENST00000401276 94 ntBASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 AC007967.2-201ENST00000432613 625 ntBASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 VN2R19P-201ENST00000442399 1052 ntBASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 POLD2P1-201ENST00000511220 997 ntBASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 AC064836.3-201ENST00000607928 673 ntBASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms