Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 AC009078.2-202ENST00000463353 338 ntBASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 AP002469.2-201ENST00000531724 424 ntBASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCC2Q8TAQ2 AC099398.1-201ENST00000567919 2776 ntBASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 AL135999.2-201ENST00000622438 1686 ntBASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 TP73-AS1-207ENST00000624167 988 ntBASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCC2Q8TAQ2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 FDX1P1-201ENST00000449115 551 ntBASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 FGFR3P6-201ENST00000457012 610 ntBASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCC2Q8TAQ2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMARCC2Q8TAQ2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms