Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 KRT19P2-202ENST00000557173 1012 ntBASIC21.53■■□□□ 1.04
LINS1Q8NG48 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 MTDHP5-201ENST00000598980 586 ntBASIC21.53■■□□□ 1.04
LINS1Q8NG48 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LINS1Q8NG48 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINS1Q8NG48 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.52■■□□□ 1.04
LINS1Q8NG48 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.52■■□□□ 1.04
LINS1Q8NG48 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.52■■□□□ 1.04
LINS1Q8NG48 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.52■■□□□ 1.04
LINS1Q8NG48 PDPK2P-202ENST00000562415 1191 ntBASIC21.52■■□□□ 1.04
LINS1Q8NG48 AC010327.4-202ENST00000591484 748 ntBASIC21.52■■□□□ 1.04
LINS1Q8NG48 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINS1Q8NG48 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LINS1Q8NG48 BCAR1-209ENST00000546196 1340 ntBASIC21.52■■□□□ 1.03
LINS1Q8NG48 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.52■■□□□ 1.03
LINS1Q8NG48 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.52■■□□□ 1.03
LINS1Q8NG48 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 AC112482.1-201ENST00000492080 688 ntBASIC21.51■■□□□ 1.03
LINS1Q8NG48 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 AC025580.3-201ENST00000617932 1424 ntBASIC21.51■■□□□ 1.03
LINS1Q8NG48 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.51■■□□□ 1.03
LINS1Q8NG48 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINS1Q8NG48 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 AC023141.13-201ENST00000604991 943 ntBASIC21.5■■□□□ 1.03
LINS1Q8NG48 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 AC007064.4-201ENST00000637740 555 ntBASIC21.5■■□□□ 1.03
LINS1Q8NG48 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINS1Q8NG48 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.5■■□□□ 1.03
LINS1Q8NG48 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 MIR1233-2-201ENST00000408138 82 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms