Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 ALG1L8P-201ENST00000533887 760 ntBASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHDC9Q8NEP7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AC092580.3-201ENST00000430932 139 ntBASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 IGHV3-42-201ENST00000520410 361 ntBASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AC069120.2-201ENST00000524091 540 ntBASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AP000842.3-202ENST00000569238 1080 ntBASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AC008267.7-201ENST00000624570 1194 ntBASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 GNAS-203ENST00000306120 1878 ntBASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHDC9Q8NEP7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KLHDC9Q8NEP7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHDC9Q8NEP7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 HCG4-201ENST00000418983 998 ntBASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 AC027307.2-201ENST00000591252 911 ntBASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 MIR6080-201ENST00000617359 66 ntBASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KLHDC9Q8NEP7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 RNU1-129P-201ENST00000384064 167 ntBASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 AL512638.1-201ENST00000457493 794 ntBASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 HLA-J-202ENST00000469281 1241 ntBASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms