Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AC004817.3-201ENST00000602957 2129 ntBASIC15.16■□□□□ 0.02
CPEB3Q8NE35 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AL135999.2-201ENST00000622438 1686 ntBASIC15.16■□□□□ 0.02
CPEB3Q8NE35 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 AC079776.2-201ENST00000641154 1609 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 RBM17P3-201ENST00000417687 1192 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 AL020989.1-201ENST00000422979 469 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 TPM4P1-201ENST00000436100 807 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 MTDHP3-201ENST00000594186 672 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 AL355877.3-201ENST00000622820 899 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 SIGLEC16-201ENST00000599858 1437 ntBASIC15.15■□□□□ 0.02
CPEB3Q8NE35 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPEB3Q8NE35 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
CPEB3Q8NE35 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.14■□□□□ 0.01
CPEB3Q8NE35 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 AF238378.1-201ENST00000526806 358 ntBASIC15.14■□□□□ 0.01
CPEB3Q8NE35 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 AC073592.4-201ENST00000623827 446 ntBASIC15.14■□□□□ 0.01
CPEB3Q8NE35 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms