Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 CR383656.12-201ENST00000549567 513 ntBASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
CFAP43Q8NDM7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 AL008721.1-201ENST00000609964 604 ntBASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 AKAP8P1-201ENST00000434743 1349 ntBASIC26.74■■□□□ 1.87
CFAP43Q8NDM7 AC116353.5-201ENST00000638148 1699 ntBASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 FAM185BP-201ENST00000443595 716 ntBASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 AC022494.1-201ENST00000466044 728 ntBASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 AC069120.2-201ENST00000524091 540 ntBASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 AC243562.1-201ENST00000560672 389 ntBASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP43Q8NDM7 PI4KAP1-204ENST00000612579 1703 ntBASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 AL359881.2-201ENST00000602973 570 ntBASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC26.72■■□□□ 1.87
CFAP43Q8NDM7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 NEFHP1-201ENST00000412845 2629 ntBASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 CALY-202ENST00000368555 783 ntTSL 2 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CFAP43Q8NDM7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 IGHV3-42-201ENST00000520410 361 ntBASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms