Protein–RNA interactions for Protein: Q8N9Z9

LMNTD1, Lamin tail domain-containing protein 1, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1Q8N9Z9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 LINC00982-205ENST00000420957 435 ntBASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 KRT18P67-201ENST00000432816 1264 ntBASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 MIR7706-201ENST00000613747 67 ntBASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNTD1Q8N9Z9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 HLA-A-201ENST00000376802 1334 ntBASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 AC073648.2-201ENST00000510116 352 ntBASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 AP002414.3-201ENST00000589352 1468 ntBASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNTD1Q8N9Z9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 AL031284.1-201ENST00000419297 478 ntBASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 AF186996.4-201ENST00000467186 377 ntBASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 OR7E14P-202ENST00000530490 1290 ntBASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 FAM215A-202ENST00000632077 792 ntBASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNTD1Q8N9Z9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms