Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 AC139713.2-201ENST00000641328 2723 ntBASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TERC-201ENST00000602385 541 ntBASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 AC008667.4-201ENST00000607370 168 ntBASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAM1L1Q8N609 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 IGHV3-65-201ENST00000523210 341 ntBASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 AC120114.3-201ENST00000611923 658 ntBASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAM1L1Q8N609 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 RNA5SP415-201ENST00000517246 115 ntBASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 UNC93B6-202ENST00000528242 690 ntBASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 GGTLC5P-201ENST00000617623 998 ntBASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 AF228730.7-201ENST00000641842 219 ntBASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms