Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 AC093677.2-201ENST00000600169 1863 ntBASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 COX20P2-201ENST00000452636 358 ntBASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 FAM86C2P-203ENST00000528684 1004 ntBASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPOQ8N3V7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.52■□□□□ 0.39
SYNPOQ8N3V7 AC129492.6-201ENST00000611383 1305 ntBASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 AC008764.6-201ENST00000595909 2069 ntBASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 AL513480.1-201ENST00000451731 511 ntBASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 AC067863.1-201ENST00000494933 530 ntBASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 LINC00628-201ENST00000628516 1289 ntBASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPOQ8N3V7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 AC100803.2-201ENST00000562459 1963 ntBASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 FAM86GP-201ENST00000448322 971 ntBASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 AC135776.1-201ENST00000319817 2481 ntBASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms