Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 FER1L4-210ENST00000615531 5998 ntBASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 AC109462.3-201ENST00000573934 613 ntBASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01561Q8N1V8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PCDHA14-201ENST00000506751 2298 ntBASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 AC010460.3-201ENST00000511359 1579 ntBASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 AL023973.1-201ENST00000624619 620 ntBASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01561Q8N1V8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms