Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 AC005034.1-201ENST00000426657 489 ntBASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 SERBP1P5-201ENST00000510079 1181 ntBASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 AL590560.3-201ENST00000623350 461 ntBASIC16.08■□□□□ 0.16
COL27A1Q8IZC6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 AC131009.4-201ENST00000624048 1740 ntBASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 AC025048.6-201ENST00000634326 1161 ntBASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL27A1Q8IZC6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 BASP1P1-201ENST00000430708 665 ntBASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 AC091167.2-201ENST00000579581 588 ntBASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 AC004790.1-201ENST00000612686 536 ntBASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 SPDYE12P-201ENST00000618416 771 ntBASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 AC004840.1-201ENST00000636359 365 ntBASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 AC133963.1-201ENST00000504166 1679 ntBASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL27A1Q8IZC6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 TERF1P3-201ENST00000505638 1227 ntBASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 MIR4453-201ENST00000584019 89 ntBASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms