Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 AL645929.1-201ENST00000420084 975 ntBASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SPDYE13P-201ENST00000445314 798 ntBASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 AL671277.2-201ENST00000458060 996 ntBASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 AC063952.2-201ENST00000498792 1227 ntBASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 GUSBP12-201ENST00000513727 720 ntBASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 AC022616.7-201ENST00000525383 220 ntBASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC50Q8IVM0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 AC002558.1-201ENST00000488906 803 ntBASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 LINC01238-205ENST00000567549 1107 ntBASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC50Q8IVM0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms