Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 NUS1P1-201ENST00000446295 882 ntBASIC19.51■□□□□ 0.71
SHC4Q6S5L8 AP000867.3-201ENST00000524675 377 ntBASIC19.51■□□□□ 0.71
SHC4Q6S5L8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 AC092329.2-201ENST00000598402 547 ntBASIC19.51■□□□□ 0.71
SHC4Q6S5L8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 AC092119.3-201ENST00000612618 583 ntBASIC19.5■□□□□ 0.71
SHC4Q6S5L8 PCDHB19P-201ENST00000570871 2371 ntBASIC19.5■□□□□ 0.71
SHC4Q6S5L8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHC4Q6S5L8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 GPR89P-201ENST00000407924 1495 ntBASIC19.49■□□□□ 0.71
SHC4Q6S5L8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 ATP5G2P1-201ENST00000433580 426 ntBASIC19.49■□□□□ 0.71
SHC4Q6S5L8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 AC069148.1-201ENST00000608741 768 ntBASIC19.49■□□□□ 0.71
SHC4Q6S5L8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHC4Q6S5L8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 AC004817.3-201ENST00000602957 2129 ntBASIC19.48■□□□□ 0.71
SHC4Q6S5L8 SPDYE21P-201ENST00000413323 827 ntBASIC19.48■□□□□ 0.71
SHC4Q6S5L8 POM121L3P-201ENST00000419331 1163 ntBASIC19.48■□□□□ 0.71
SHC4Q6S5L8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 AC104819.1-201ENST00000504587 486 ntBASIC19.48■□□□□ 0.71
SHC4Q6S5L8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SHC4Q6S5L8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SHC4Q6S5L8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.47■□□□□ 0.71
SHC4Q6S5L8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SHC4Q6S5L8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms