Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DUTP2-201ENST00000519164 463 ntBASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.45□□□□□ -0.26
KCNIP4Q6PIL6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AL109659.2-201ENST00000606809 1674 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 POU5F1P3-201ENST00000428824 1078 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 SOX15-203ENST00000570788 1093 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AC104771.1-201ENST00000603335 964 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AC116407.2-201ENST00000613639 860 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AL121829.2-201ENST00000620908 328 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AL365203.3-201ENST00000609742 2057 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AC092384.3-202ENST00000564646 2873 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AL662844.4-201ENST00000606367 2838 ntBASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
KCNIP4Q6PIL6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 AC022898.2-201ENST00000616822 1312 ntBASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 MIR149-201ENST00000384879 89 ntBASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
KCNIP4Q6PIL6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms