Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AF186996.4-201ENST00000467186 377 ntBASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AL160237.2-201ENST00000556165 472 ntBASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 LTB4R2-202ENST00000528054 3092 ntBASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 AC073621.1-201ENST00000392730 636 ntBASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC41PQ6P2S7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 ELK2BP-201ENST00000415014 1224 ntBASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 TPM4P1-201ENST00000436100 807 ntBASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 DUX4L17-201ENST00000557360 1267 ntBASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 AC008735.5-201ENST00000623544 497 ntBASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 AC148477.8-201ENST00000624298 468 ntBASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC41PQ6P2S7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
TTC41PQ6P2S7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TTC41PQ6P2S7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
TTC41PQ6P2S7 AC006504.4-201ENST00000592118 1568 ntBASIC20.95■□□□□ 0.95
TTC41PQ6P2S7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
TTC41PQ6P2S7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TTC41PQ6P2S7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms