Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 MCCD1P2-201ENST00000423228 335 ntBASIC20.81■□□□□ 0.92
RFX7Q2KHR2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.81■□□□□ 0.92
RFX7Q2KHR2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 AC112482.1-201ENST00000492080 688 ntBASIC20.81■□□□□ 0.92
RFX7Q2KHR2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 AL590787.1-201ENST00000568856 1315 ntBASIC20.81■□□□□ 0.92
RFX7Q2KHR2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 AC002310.6-201ENST00000624451 1377 ntBASIC20.81■□□□□ 0.92
RFX7Q2KHR2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 YBX1P5-201ENST00000509441 847 ntBASIC20.8■□□□□ 0.92
RFX7Q2KHR2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 MIR4751-201ENST00000578027 74 ntBASIC20.8■□□□□ 0.92
RFX7Q2KHR2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.8■□□□□ 0.92
RFX7Q2KHR2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 PRSS29P-201ENST00000440800 595 ntBASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AP006288.1-201ENST00000446065 395 ntBASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 OR7E47P-204ENST00000575924 449 ntBASIC20.79■□□□□ 0.92
RFX7Q2KHR2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 AL121761.2-201ENST00000598007 1648 ntBASIC20.79■□□□□ 0.92
RFX7Q2KHR2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX7Q2KHR2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 VN2R19P-201ENST00000442399 1052 ntBASIC20.78■□□□□ 0.92
RFX7Q2KHR2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 DUX4L17-201ENST00000557360 1267 ntBASIC20.78■□□□□ 0.92
RFX7Q2KHR2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.78■□□□□ 0.92
RFX7Q2KHR2 AC010654.1-201ENST00000615722 808 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms