Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM4P67936 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM4P67936 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM4P67936 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM4P67936 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM4P67936 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM4P67936 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM4P67936 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM4P67936 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM4P67936 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM4P67936 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.42■□□□□ 0.7
TPM4P67936 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM4P67936 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TPM4P67936 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM4P67936 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.41■□□□□ 0.7
TPM4P67936 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TPM4P67936 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TPM4P67936 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 MYCLP1-201ENST00000372451 1075 ntBASIC19.41■□□□□ 0.7
TPM4P67936 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.41■□□□□ 0.7
TPM4P67936 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.41■□□□□ 0.7
TPM4P67936 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM4P67936 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.41■□□□□ 0.7
TPM4P67936 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TPM4P67936 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM4P67936 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 AL513477.1-201ENST00000602865 2407 ntBASIC19.41■□□□□ 0.7
TPM4P67936 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM4P67936 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TPM4P67936 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TPM4P67936 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.4■□□□□ 0.7
TPM4P67936 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM4P67936 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM4P67936 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TPM4P67936 ECEL1P3-201ENST00000427961 737 ntBASIC19.4■□□□□ 0.7
TPM4P67936 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
TPM4P67936 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.4■□□□□ 0.7
TPM4P67936 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM4P67936 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.4■□□□□ 0.7
TPM4P67936 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM4P67936 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM4P67936 AL136038.4-201ENST00000603606 1261 ntBASIC19.4■□□□□ 0.7
TPM4P67936 FAM87A-204ENST00000613235 858 ntBASIC19.4■□□□□ 0.7
TPM4P67936 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms