Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP1S1P61966 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AP1S1P61966 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S1P61966 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S1P61966 AC141586.5-201ENST00000624546 2050 ntBASIC17.4■□□□□ 0.38
AP1S1P61966 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP1S1P61966 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.39■□□□□ 0.37
AP1S1P61966 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.39■□□□□ 0.37
AP1S1P61966 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.39■□□□□ 0.37
AP1S1P61966 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.39■□□□□ 0.37
AP1S1P61966 AC098831.1-202ENST00000438821 336 ntBASIC17.39■□□□□ 0.37
AP1S1P61966 RPS15P9-201ENST00000494093 319 ntBASIC17.39■□□□□ 0.37
AP1S1P61966 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.39■□□□□ 0.37
AP1S1P61966 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.39■□□□□ 0.37
AP1S1P61966 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP1S1P61966 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S1P61966 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.39■□□□□ 0.37
AP1S1P61966 AC005332.8-201ENST00000622750 2735 ntBASIC17.39■□□□□ 0.37
AP1S1P61966 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S1P61966 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP1S1P61966 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP1S1P61966 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.38■□□□□ 0.37
AP1S1P61966 PTCHD3P3-201ENST00000403073 906 ntBASIC17.38■□□□□ 0.37
AP1S1P61966 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.38■□□□□ 0.37
AP1S1P61966 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 BX640515.1-201ENST00000617215 977 ntBASIC17.38■□□□□ 0.37
AP1S1P61966 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.38■□□□□ 0.37
AP1S1P61966 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.38■□□□□ 0.37
AP1S1P61966 AC117500.6-201ENST00000624871 588 ntBASIC17.38■□□□□ 0.37
AP1S1P61966 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S1P61966 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP1S1P61966 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP1S1P61966 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.38■□□□□ 0.37
AP1S1P61966 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
AP1S1P61966 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AP1S1P61966 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.37■□□□□ 0.37
AP1S1P61966 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.37■□□□□ 0.37
AP1S1P61966 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
AP1S1P61966 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.37■□□□□ 0.37
AP1S1P61966 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AP1S1P61966 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.37■□□□□ 0.37
AP1S1P61966 IGHV3-22-201ENST00000520721 359 ntBASIC17.37■□□□□ 0.37
AP1S1P61966 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S1P61966 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.37■□□□□ 0.37
AP1S1P61966 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.37■□□□□ 0.37
AP1S1P61966 TERC-201ENST00000602385 541 ntBASIC17.37■□□□□ 0.37
AP1S1P61966 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms