Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.14□□□□□ -0.15
SPCS3P61009 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 TSPY12P-201ENST00000421279 868 ntBASIC14.14□□□□□ -0.15
SPCS3P61009 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 SNORA78-201ENST00000459373 127 ntBASIC14.14□□□□□ -0.15
SPCS3P61009 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.14□□□□□ -0.15
SPCS3P61009 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.14□□□□□ -0.15
SPCS3P61009 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SPCS3P61009 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.14□□□□□ -0.15
SPCS3P61009 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SPCS3P61009 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
SPCS3P61009 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 AC106886.4-201ENST00000623557 2502 ntBASIC14.14□□□□□ -0.15
SPCS3P61009 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 AC116353.5-201ENST00000638148 1699 ntBASIC14.14□□□□□ -0.15
SPCS3P61009 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 MMP23A-201ENST00000234610 1017 ntBASIC14.13□□□□□ -0.15
SPCS3P61009 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.13□□□□□ -0.15
SPCS3P61009 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.13□□□□□ -0.15
SPCS3P61009 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 AP006294.2-201ENST00000641667 209 ntBASIC14.13□□□□□ -0.15
SPCS3P61009 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SPCS3P61009 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SPCS3P61009 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPCS3P61009 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SPCS3P61009 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.12□□□□□ -0.15
SPCS3P61009 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms