Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 ELK2BP-201ENST00000415014 1224 ntBASIC16.25■□□□□ 0.19
RAB38P57729 KRT18P27-201ENST00000427733 1299 ntBASIC16.25■□□□□ 0.19
RAB38P57729 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 AC093909.1-201ENST00000504731 1122 ntBASIC16.25■□□□□ 0.19
RAB38P57729 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 AC105339.3-201ENST00000560043 636 ntBASIC16.25■□□□□ 0.19
RAB38P57729 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.25■□□□□ 0.19
RAB38P57729 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 MIR7706-201ENST00000613747 67 ntBASIC16.25■□□□□ 0.19
RAB38P57729 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB38P57729 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 AL645608.8-201ENST00000606034 2086 ntBASIC16.25■□□□□ 0.19
RAB38P57729 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB38P57729 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.24■□□□□ 0.19
RAB38P57729 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB38P57729 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 AC026396.1-201ENST00000419388 421 ntBASIC16.24■□□□□ 0.19
RAB38P57729 RNA5SP419-201ENST00000515908 135 ntBASIC16.24■□□□□ 0.19
RAB38P57729 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 MIR1199-201ENST00000621445 119 ntBASIC16.24■□□□□ 0.19
RAB38P57729 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 AC006504.4-201ENST00000592118 1568 ntBASIC16.24■□□□□ 0.19
RAB38P57729 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB38P57729 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB38P57729 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB38P57729 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 HLA-A-201ENST00000376802 1334 ntBASIC16.23■□□□□ 0.19
RAB38P57729 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB38P57729 AC073621.1-201ENST00000392730 636 ntBASIC16.23■□□□□ 0.19
RAB38P57729 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB38P57729 FDX1P1-201ENST00000449115 551 ntBASIC16.23■□□□□ 0.19
RAB38P57729 AC136632.2-201ENST00000512891 861 ntBASIC16.23■□□□□ 0.19
RAB38P57729 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB38P57729 AC012640.2-201ENST00000561606 901 ntBASIC16.23■□□□□ 0.19
RAB38P57729 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB38P57729 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB38P57729 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB38P57729 AL049840.3-201ENST00000602669 611 ntBASIC16.23■□□□□ 0.19
RAB38P57729 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB38P57729 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB38P57729 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB38P57729 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB38P57729 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAB38P57729 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB38P57729 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAB38P57729 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms