Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.05■□□□□ 0.64
PEX3P56589 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PEX3P56589 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 AL590787.1-201ENST00000568856 1315 ntBASIC19.04■□□□□ 0.64
PEX3P56589 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.04■□□□□ 0.64
PEX3P56589 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 SLC25A1P3-201ENST00000395415 828 ntBASIC19.04■□□□□ 0.64
PEX3P56589 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 AC093525.9-201ENST00000624961 1746 ntBASIC19.04■□□□□ 0.64
PEX3P56589 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEX3P56589 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 AC116353.5-201ENST00000638148 1699 ntBASIC19.04■□□□□ 0.64
PEX3P56589 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.04■□□□□ 0.64
PEX3P56589 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.04■□□□□ 0.64
PEX3P56589 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
PEX3P56589 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.03■□□□□ 0.64
PEX3P56589 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.03■□□□□ 0.64
PEX3P56589 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.03■□□□□ 0.64
PEX3P56589 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 AL590627.1-203ENST00000421194 1026 ntBASIC19.03■□□□□ 0.64
PEX3P56589 AC098831.1-202ENST00000438821 336 ntBASIC19.03■□□□□ 0.64
PEX3P56589 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 AC136632.2-201ENST00000512891 861 ntBASIC19.03■□□□□ 0.64
PEX3P56589 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.03■□□□□ 0.64
PEX3P56589 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.03■□□□□ 0.64
PEX3P56589 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.03■□□□□ 0.64
PEX3P56589 MIR1199-201ENST00000621445 119 ntBASIC19.03■□□□□ 0.64
PEX3P56589 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.03■□□□□ 0.64
PEX3P56589 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PEX3P56589 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PEX3P56589 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.03■□□□□ 0.64
PEX3P56589 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.02■□□□□ 0.64
PEX3P56589 IL9RP2-201ENST00000423948 1312 ntBASIC19.02■□□□□ 0.64
PEX3P56589 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.02■□□□□ 0.64
PEX3P56589 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PEX3P56589 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.02■□□□□ 0.64
PEX3P56589 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.02■□□□□ 0.64
PEX3P56589 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.02■□□□□ 0.64
PEX3P56589 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.02■□□□□ 0.64
PEX3P56589 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 AC117500.6-201ENST00000624871 588 ntBASIC19.02■□□□□ 0.64
PEX3P56589 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PEX3P56589 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PEX3P56589 GPR89P-201ENST00000407924 1495 ntBASIC19.02■□□□□ 0.63
PEX3P56589 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PEX3P56589 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 AL023806.1-201ENST00000603994 1649 ntBASIC19.01■□□□□ 0.63
PEX3P56589 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms