Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC006557.2-201ENST00000592985 1240 ntBASIC18.45■□□□□ 0.54
CDH8P55286 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH8P55286 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDH8P55286 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH8P55286 AL023806.1-201ENST00000603994 1649 ntBASIC18.45■□□□□ 0.54
CDH8P55286 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH8P55286 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.44■□□□□ 0.54
CDH8P55286 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH8P55286 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH8P55286 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH8P55286 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDH8P55286 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH8P55286 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDH8P55286 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH8P55286 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CDH8P55286 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH8P55286 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH8P55286 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH8P55286 PTCHD3P3-201ENST00000403073 906 ntBASIC18.43■□□□□ 0.54
CDH8P55286 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.43■□□□□ 0.54
CDH8P55286 AL356488.2-201ENST00000602755 427 ntBASIC18.43■□□□□ 0.54
CDH8P55286 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDH8P55286 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH8P55286 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH8P55286 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDH8P55286 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH8P55286 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 AC098831.1-202ENST00000438821 336 ntBASIC18.42■□□□□ 0.54
CDH8P55286 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 AC093909.1-201ENST00000504731 1122 ntBASIC18.42■□□□□ 0.54
CDH8P55286 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms