Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.46■□□□□ 0.23
NR1H2P55055 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.46■□□□□ 0.23
NR1H2P55055 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
NR1H2P55055 AL121956.5-201ENST00000625261 221 ntBASIC16.46■□□□□ 0.23
NR1H2P55055 AL358472.4-201ENST00000633140 710 ntBASIC16.46■□□□□ 0.23
NR1H2P55055 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NR1H2P55055 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
NR1H2P55055 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.46■□□□□ 0.22
NR1H2P55055 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NR1H2P55055 LINC00304-203ENST00000565008 1864 ntBASIC16.46■□□□□ 0.22
NR1H2P55055 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.46■□□□□ 0.22
NR1H2P55055 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.45■□□□□ 0.22
NR1H2P55055 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.45■□□□□ 0.22
NR1H2P55055 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.45■□□□□ 0.22
NR1H2P55055 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.45■□□□□ 0.22
NR1H2P55055 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.45■□□□□ 0.22
NR1H2P55055 AL023973.1-201ENST00000624619 620 ntBASIC16.45■□□□□ 0.22
NR1H2P55055 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.45■□□□□ 0.22
NR1H2P55055 LYSMD4-203ENST00000378904 2122 ntBASIC16.45■□□□□ 0.22
NR1H2P55055 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
NR1H2P55055 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.45■□□□□ 0.22
NR1H2P55055 HLA-J-201ENST00000462773 1622 ntBASIC16.45■□□□□ 0.22
NR1H2P55055 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
NR1H2P55055 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR1H2P55055 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 AP000593.1-201ENST00000393668 712 ntBASIC16.44■□□□□ 0.22
NR1H2P55055 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 AP000550.4-202ENST00000639755 178 ntBASIC16.44■□□□□ 0.22
NR1H2P55055 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.44■□□□□ 0.22
NR1H2P55055 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H2P55055 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.44■□□□□ 0.22
NR1H2P55055 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms