Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NEK3P51956 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 ABCD1P5-201ENST00000445663 754 ntBASIC17.86■□□□□ 0.45
NEK3P51956 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
NEK3P51956 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 SLC25A6P4-201ENST00000586535 553 ntBASIC17.86■□□□□ 0.45
NEK3P51956 AC064862.7-201ENST00000604520 867 ntBASIC17.86■□□□□ 0.45
NEK3P51956 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.86■□□□□ 0.45
NEK3P51956 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NEK3P51956 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NEK3P51956 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEK3P51956 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NEK3P51956 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.85■□□□□ 0.45
NEK3P51956 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
NEK3P51956 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.85■□□□□ 0.45
NEK3P51956 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NEK3P51956 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.85■□□□□ 0.45
NEK3P51956 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
NEK3P51956 MTDHP3-201ENST00000594186 672 ntBASIC17.85■□□□□ 0.45
NEK3P51956 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
NEK3P51956 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.85■□□□□ 0.45
NEK3P51956 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
NEK3P51956 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.85■□□□□ 0.45
NEK3P51956 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.85■□□□□ 0.45
NEK3P51956 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NEK3P51956 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEK3P51956 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.84■□□□□ 0.45
NEK3P51956 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
NEK3P51956 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 MRPL3P1-201ENST00000400109 1033 ntBASIC17.84■□□□□ 0.45
NEK3P51956 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 FAM197Y8-203ENST00000450145 560 ntBASIC17.84■□□□□ 0.45
NEK3P51956 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 FGFR3P6-201ENST00000457012 610 ntBASIC17.84■□□□□ 0.45
NEK3P51956 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.84■□□□□ 0.45
NEK3P51956 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.84■□□□□ 0.45
NEK3P51956 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.84■□□□□ 0.45
NEK3P51956 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.84■□□□□ 0.45
NEK3P51956 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.84■□□□□ 0.45
NEK3P51956 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NEK3P51956 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.84■□□□□ 0.45
NEK3P51956 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.84■□□□□ 0.45
NEK3P51956 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms