Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AP002414.1-201ENST00000391405 1147 ntBASIC19.08■□□□□ 0.64
GPC3P51654 YBX2P1-201ENST00000394192 760 ntBASIC19.08■□□□□ 0.64
GPC3P51654 CRYGEP-201ENST00000412192 528 ntBASIC19.08■□□□□ 0.64
GPC3P51654 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC3P51654 VN2R19P-201ENST00000442399 1052 ntBASIC19.08■□□□□ 0.64
GPC3P51654 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC3P51654 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
GPC3P51654 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC3P51654 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC3P51654 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.08■□□□□ 0.64
GPC3P51654 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC3P51654 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.08■□□□□ 0.64
GPC3P51654 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
GPC3P51654 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.08■□□□□ 0.64
GPC3P51654 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GPC3P51654 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC3P51654 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.08■□□□□ 0.64
GPC3P51654 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.08■□□□□ 0.64
GPC3P51654 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC3P51654 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 AL138688.1-201ENST00000624851 1594 ntBASIC19.07■□□□□ 0.64
GPC3P51654 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC3P51654 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.07■□□□□ 0.64
GPC3P51654 AC023274.1-201ENST00000418278 595 ntBASIC19.07■□□□□ 0.64
GPC3P51654 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 PRSS29P-201ENST00000440800 595 ntBASIC19.07■□□□□ 0.64
GPC3P51654 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.07■□□□□ 0.64
GPC3P51654 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC3P51654 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC3P51654 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
GPC3P51654 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.07■□□□□ 0.64
GPC3P51654 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 AL590787.1-201ENST00000568856 1315 ntBASIC19.06■□□□□ 0.64
GPC3P51654 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GPC3P51654 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 AC004832.2-201ENST00000426397 482 ntBASIC19.06■□□□□ 0.64
GPC3P51654 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 HCG4B-203ENST00000450128 991 ntBASIC19.06■□□□□ 0.64
GPC3P51654 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.06■□□□□ 0.64
GPC3P51654 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.06■□□□□ 0.64
GPC3P51654 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC3P51654 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GPC3P51654 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.06■□□□□ 0.64
GPC3P51654 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC3P51654 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GPC3P51654 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.05■□□□□ 0.64
GPC3P51654 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.05■□□□□ 0.64
GPC3P51654 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.05■□□□□ 0.64
GPC3P51654 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GPC3P51654 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms