Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC30.28■■■□□ 2.44
SMARCA2P51531 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
SMARCA2P51531 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCA2P51531 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCA2P51531 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCA2P51531 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
SMARCA2P51531 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC30.28■■■□□ 2.44
SMARCA2P51531 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCA2P51531 AL138918.1-201ENST00000568306 659 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC30.28■■■□□ 2.44
SMARCA2P51531 RNA5-8SN1-201ENST00000610460 153 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 RNA5-8SN5-202ENST00000612463 153 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 RNA5-8SN4-201ENST00000613359 153 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 RNA5-8SN5-201ENST00000619471 153 ntBASIC30.28■■■□□ 2.44
SMARCA2P51531 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCA2P51531 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCA2P51531 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SMARCA2P51531 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCA2P51531 AP3S2-216ENST00000617003 1561 ntBASIC30.27■■■□□ 2.44
SMARCA2P51531 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCA2P51531 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC30.27■■■□□ 2.44
SMARCA2P51531 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCA2P51531 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC30.27■■■□□ 2.44
SMARCA2P51531 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
SMARCA2P51531 FLJ13224-201ENST00000313737 1514 ntBASIC30.27■■■□□ 2.44
SMARCA2P51531 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCA2P51531 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC30.27■■■□□ 2.44
SMARCA2P51531 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.44
SMARCA2P51531 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.44
SMARCA2P51531 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC30.26■■■□□ 2.44
SMARCA2P51531 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SMARCA2P51531 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC30.26■■■□□ 2.43
SMARCA2P51531 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SMARCA2P51531 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
SMARCA2P51531 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC30.26■■■□□ 2.43
SMARCA2P51531 LINC00895-201ENST00000629028 1637 ntBASIC30.26■■■□□ 2.43
SMARCA2P51531 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
SMARCA2P51531 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SMARCA2P51531 HLA-DQB1-201ENST00000374943 1656 ntBASIC30.26■■■□□ 2.43
SMARCA2P51531 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCA2P51531 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCA2P51531 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC30.25■■■□□ 2.43
SMARCA2P51531 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC30.25■■■□□ 2.43
SMARCA2P51531 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCA2P51531 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCA2P51531 AC098614.1-201ENST00000368528 745 ntBASIC30.25■■■□□ 2.43
SMARCA2P51531 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC30.25■■■□□ 2.43
SMARCA2P51531 AL080243.2-201ENST00000418783 582 ntBASIC30.25■■■□□ 2.43
SMARCA2P51531 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC30.25■■■□□ 2.43
SMARCA2P51531 BANF1P1-201ENST00000553684 263 ntBASIC30.25■■■□□ 2.43
SMARCA2P51531 POLE2-203ENST00000553805 496 ntTSL 2 BASIC30.25■■■□□ 2.43
SMARCA2P51531 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
SMARCA2P51531 SLC25A24-204ENST00000569674 2357 ntBASIC30.25■■■□□ 2.43
SMARCA2P51531 AC087499.5-201ENST00000452760 1342 ntBASIC30.25■■■□□ 2.43
SMARCA2P51531 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
SMARCA2P51531 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
SMARCA2P51531 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 LINC01451-201ENST00000623792 534 ntBASIC30.24■■■□□ 2.43
SMARCA2P51531 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC30.24■■■□□ 2.43
SMARCA2P51531 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC30.24■■■□□ 2.43
SMARCA2P51531 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
SMARCA2P51531 MADD-208ENST00000405573 1823 ntTSL 5 BASIC30.24■■■□□ 2.43
SMARCA2P51531 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC30.24■■■□□ 2.43
SMARCA2P51531 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC30.24■■■□□ 2.43
SMARCA2P51531 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCA2P51531 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
SMARCA2P51531 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
SMARCA2P51531 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC30.23■■■□□ 2.43
SMARCA2P51531 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
SMARCA2P51531 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC30.23■■■□□ 2.43
SMARCA2P51531 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC30.23■■■□□ 2.43
SMARCA2P51531 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC30.23■■■□□ 2.43
SMARCA2P51531 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC30.23■■■□□ 2.43
SMARCA2P51531 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC30.23■■■□□ 2.43
SMARCA2P51531 RPS2P32-201ENST00000439199 892 ntBASIC30.23■■■□□ 2.43
SMARCA2P51531 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
SMARCA2P51531 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC30.23■■■□□ 2.43
SMARCA2P51531 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCA2P51531 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCA2P51531 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCA2P51531 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCA2P51531 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC30.23■■■□□ 2.43
SMARCA2P51531 STK4-201ENST00000372801 2038 ntTSL 2 BASIC30.23■■■□□ 2.43
SMARCA2P51531 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCA2P51531 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC30.22■■■□□ 2.43
SMARCA2P51531 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCA2P51531 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCA2P51531 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SMARCA2P51531 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC30.22■■■□□ 2.43
SMARCA2P51531 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCA2P51531 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
SMARCA2P51531 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms